EvOG System Demo (To use EvOG, JRE(JRE 1.6 or newest) must be installed on your computer: Down-Link)

  Finding Overlapping Genes
  (each gene name should be separated by a comma or space.)

    Gene Name:
    EvOG supports the following quries.
A. Among 17 genomes, Gi = { Human, Chimpanzee, Orangutan, Rhesus, Cow, Horse, Platypus, Dog, Cat, Chicken, ZebraFinch, Opossum, Mouse, Rat, X. tropicalis, Medaka, Zebrafish }, for a query gene A, you can retrieve all overlapping genes with A in Gi
B. You can check whether two different genes A and B are overlapping in Gi
C. For a set of {Gi}, you can find all overlapping positive and negative genes which are common among {Gi}
D. With the physical configuration of all overlapping positive and negative genes, EvOG reconstructs a Phylogenetic tree according to those overlapping structure.

Constructing Phylogenetic Tree from Overlapping (Positive, Negative) Genes over Multiple Species (To use EvOG, JRE(JRE 1.6 or newest) must be installed on your computer: Down-Link)


  Get Overlapping Phylogeny Tree

     Gene Names:

Find Overlapping Common Genes among Multiple Genomes

Database genomes
No  SpeciesNo. of Genes
(UCSC Genome based)		No  SpeciesNo. of Genes
(UCSC Genome based)
1  Human 29,772   14  Rat 15,667   
2  Chimpanzee 29,948   15  X. tropicalis 9,431   
3  Orangutan 3,400   16  Medaka  397   
4  Rhesus 542   17  Zebrafish 14,580   
5  Cow 10,208      
6  Horse  359      
7  Platypus  24      
8  Dog 944      
9  Cat 459      
10  Chicken 4,363      
11  ZebraFinch  47      
12  Opossum  171      
13  Mouse 22,286      

  Find Common Overlapping Pairs   
Example: A typical overlapping Gene Pair
(To use EvOG, JRE(JRE 1.6 or newest) must be installed on your computer: Down-Link)


  Example: A typical overlapping Gene Pair

         Gene Names:


Graphics Application Lab., Dept. of Computer Science,
Molecular Biology & Phylogeny Lab.,
Pusan National University
San-30, Jangjeon-dong, Keumjeong-gu, Pusan, 609-735, South Korea.
Phone: +82-51-582-5009 Fax: +82-51-515-2208